2024 Integrated metabolomics and transcriptomics

Integrated metabolomics and transcriptomics

Author: kulg

August undefined, 2024

Nettet6. okt. 2024 · Transcriptomics data have been integrated with genome-wide association studies (GWASs) to help understand disease/trait molecular mechanisms. The utility of … NettetTranscriptomic and metabolomic pathway analysis indicated that carbohydrate metabolism may not play an important role in the resistance of canola to alkaline salt …

Integrating transcriptomics, metabolomics, and GWAS helps reveal ...

Nettet18. mai 2024 · Integrated analyses of metabolomic and transcriptomic data indicated that metabolic processes including lipid metabolism, amino acid metabolism, and carbohydrate metabolism were most affected. Exogenous addition of the key metabolite l -arginine significantly facilitated ZEA metabolism and ameliorated ZEA-induced reactive oxygen … NettetIntegrated Metabolomics and Transcriptomics Unravel the Metabolic Pathway Variations for Different Sized Beech Mushrooms by Su Young Son 1, Yu Jin Park 1, Eun Sung Jung 2, Digar Singh 1, Young Wook Lee 3, Jeong-Gu Kim 4,* and Choong Hwan Lee 1,2,5,* 1 Department of Bioscience and Biotechnology, Konkuk University, Seoul … the wave streamen

Integrated Metabolomics and Transcriptomics Analyses Reveal …

Nettet22. apr. 2024 · The integrated analysis compared the metabolic profiles and transcriptomes of different types of rice, identifying 358 differentially accumulated metabolites (DAMs) and 1982 differentially expressed genes (DEGs), establishing a … NettetHowever, the integration of metabolomics and transcriptomics to identify dysregulated metabolites and genes in the psoriatic skin is lacking. In this study, we performed an … the wave summary

CRAN Task View: Genomics, Proteomics, Metabolomics, …

Integration of metabolomics and transcriptomics to reveal anti …

Nettet23. jul. 2024 · Integrated analysis of transcriptomics and metabolomics showed that cyanidin 3,5-O-diglucoside, ... Meng J, Wang B, He G, Wang Y, Tang XF, Wang SM, et al. Metabolomics integrated with transcriptomics reveals redirection of the phenylpropanoids metabolic flux in Ginkgo biloba. J Agric Food Chem. … Nettet7. feb. 2024 · INTEGRATE returns as final main output two lists of metabolic fluxes: 1) fluxes that vary across cells consistently with both metabolic and transcriptional regulation 2) fluxes that vary consistently with metabolic regulation only. The core process of INTEGRATE methodology is depicted in Fig 1. the wave summary by chaptersNettet7. feb. 2024 · Furthermore, RNA-Seq analyses also found that numerous genes associated with metabolism were significantly changed, such as Hk-1, in CRS-induced hair growth inhibition. Overall, our study supplied new insights into the hair growth inhibition induced by CRS from the perspective of integrated metabolomics and transcriptomics analyses. the wave street surfing board

"Nettet11. nov. 2024 · Metabolomic data were integrated with whole blood transcriptomic data for each participant at diagnosis and throughout treatment for drug-susceptible TB. A … " - Integrated metabolomics and transcriptomics

Integrated metabolomics and transcriptomics

Integration of metabolomics and transcriptomics reveals short …

Nettet27. mar. 2024 · To explore the molecular mechanisms of peach brunches in response to cold, we analyzed the metabolomics and transcriptomics of 'Donghe No.1' (cold-tolerant, CT) and '21 st Century' (cold-sensitive, CS) treated by different temperatures (-5 to -30°C) for 12 h. Some cold-responsive metabolites (e.g., saccharides, phenolic acids … Nettet26. feb. 2024 · To gain mechanistic insights into the metabolic effects of this ribosome biogenesis defect on metabolism, we developed TC-iReMet2, a constraint-based modelling approach that integrates relative...

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Nettet7. apr. 2024 · We integrated patients’ metabolomics data with the PBMC transcriptomics data using an unsupervised clustering method called Similarity Network Fusion (SNF), and identified two subtypes in early and late MCI patients, respectively. Nettet2 dager siden · Metabolomics (LC-MS/MS) is an important technology for characterizing related bioactive substances (such as flavonoids, phenols, and carotenoids) in maize …

Nettet10. apr. 2024 · Here, based on integrated analysis of transcriptomics and metabolomics, we systematically investigated changes in cotyledon weight and young root growth in response to alkali stress in two ecotypes of wild soybean after germination to reveal alkali-resistance mechanisms in barren-tolerant wild soybean. NettetAn integrated analysis of metabolic and transcriptomic data revealed that the abundances of some major ﬂavonoids (especially ﬂavone and ﬂavonol) were most signiﬁcantly increased, while other...

Nettet7. feb. 2024 · Furthermore, RNA-Seq analyses also found that numerous genes associated with metabolism were significantly changed, such as Hk-1, in CRS-induced hair growth … NettetThis study aims to integrate transcriptomic and metabolomic data to increase our understanding of tumor hypoxia in breast cancer. 2. Results and Discussion ... discover the metabolites associated with hypoxia and time-dependent biomarkers but also with the approach of a combined transcriptomics and metabolomics model, ...

Nettet7. apr. 2024 · Integrated Metabolomics and Transcriptomics Analysis Identifies Molecular Subtypes within the Early and Late Mild Cognitive Impairment Stages of Alzheimer's Disease April 2024 DOI: 10.1101/2024.04 ...

Nettet24. des. 2024 · In this study, untargeted proton nuclear magnetic resonance (1 H NMR) metabolomics and transcriptomics data were used to uncover the global metabolic … the wave summary chapter 13NettetMethods: A combination of transcriptomics and metabolomics, together with general pathophysiological tests were performed to assess the hepatic response of male … the wave summary litchartsNettet1. jan. 2024 · An integrated metabolomics-transcriptomics approach has been developed. • 86/189 diagnostic metabolomic/transcriptomic biomarkers are found. • Pathogenesis of schizophrenia is studied based on the biomarkers. • Characteristic metabolomic/transcriptomic spectrums are established. • the wave summary bookNettet13. apr. 2024 · As a starchy and edible tropical plant, cassava (Manihot esculenta Crantz) has been widely used as an industrial raw material and a dietary source. However, the metabolomic and genetic differences in specific germplasms of cassava storage root were unclear. In this study, two specific germplasms, M. esculenta Crantz cv. sugar cassava … the wave summary chapter 1Nettet1. jun. 2024 · Transcriptomics and metabolomics analyses revealed that large numbers of differentially expressed genes (DEGs) and significantly changed metabolites … the wave summary chapter 9Nettet1. nov. 2024 · Integrated metabolomics and transcriptomics study of traditional herb Astragalus membranaceus Bge. var. mongolicus (Bge.) Hsiao reveals global metabolic profile and novel phytochemical ingredients Xueting Wu, Xuetong Li, +8 authors Xuan Li Published 1 November 2024 Biology BMC Genomics Astragalus membranaceus Bge. … the wave street inn montereyNettet1. apr. 2024 · This study combined metabolomics and transcriptomic approaches to explore the metabolic network and comprehensively understand the correlation between gene expressions and metabolite biosynthesis, especially flavonoids and amino acids, in the white and the red fruits of F. pentaphylla. the wave summary chapter 7